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Currently the following example RNA secondary structures are available: Signal Recognition Particle (SRP) RNA (obtained from PDB structure 1E8O) Yeast Phenylalanine tRNA (obtained from PDB structure 1EHZ) Ribonuclease P of the A-type (obtained from PDB structure 1U9S) Ribonuclease P RNA (obtained from PDB structure 1NBS) Thermotoga maritima lysine riboswitch (obtained from PDB structure 3DIL) Group I ribozyme domain (obtained from PDB structure 1GID) 7S.S SRP RNA of M. jannaschii (obtained from PDB structure 1LNG) E. coli cysteinyl-tRNA (obtained from PDB structure 1B23) Thiamine pyrophosphate-specific riboswitch (obtained from PDB structure 2GDI) S-adenosylmethionine riboswitch regulatory mRNA element (obtained from PDB structure 2GIS) Self-spliced group II intron (obtained from PDB structure 3BWP) Bacterial Ribonuclease P RNA (obtained from PDB structure 2A64) Thermus Thermophilus 70S Ribosome (obtained from PDB structure 2J00)